L2BMS
Exploration, exploitation, diversification of the chemistry of life
Biocatalysis
Biocatalysis is one of the approaches of green chemistry. By using the catalysts of the living world, the enzymes, it is possible to access reactivities that are unusual or non-existent in conventional chemistry under conditions compatible with environmental protection. A biocatalytic stage may then effectively replace a stage in an existing process but, even more advantageously, the particular reactivities of enzymes enable the design of new synthesis routes with sequences of biocatalytic stages enabling faster and more effective access to the products of interest.
Bioremediation
Understanding and laboratory selection of microbial degradation processes for persistant anthropogenic pollutants is a prerequisite for further bioremediation applications. The team has long-standing expertise in biodiversity mining of contaminated natural environments through micro-organisms cultivation in strict anaerobic conditions, consortia maintenance and isolation of strains along with their molecular characterization. Degradation of the highly chlorinated recalcitrant pesticide chlordecone has been the flagshift project. The team’s interest is now shifting towards different emerging pollutant targets by combining microbial cultivation and genetic engineering approaches.
Synthetic Metabolism
The team constructs and/or selects microorganisms endowed with new metabolic capabilities for application objectives using the techniques of metabolic engineering and in vivo evolution:
Enhancement of the biocatalysts of interest for synthetic organic chemistry.
Acclimatization of non-natural compounds as essential metabolites and modification of the chemical repertory of the microorganisms for confined artificial biodiversity.
Implementation and enhancement of metabolic pathways for use of 1-carbon carbon resources (formate, CO2).
In general, the implementation of the projects exploits the principle of genetic selection.
Last publications
- The complete genome sequence of elite bread wheat cultivar
Akpinar B, Leroy P, Watson-Haigh N, Baumann U, Barbe V, Budak H
F1000Research 11 https://f1000research.com/articles/11-614/v1, 2022 - Structure and Mutation of the Native Amine Dehydrogenase MATOUAmDH2 Bennett M, Ducrot L, Vergne-Vaxelaire C, Grogan G Chembiochem: e202200136 https://chemistry-europe.onlinelibrary.wiley.com/doi/10.1002/cbic.202200136, 2022
- Nitrilase immobilization and transposition from a micro-scale batch to a continuous process increase the nicotinic acid productivity
Teepakorn C, Zajkoska P, Cwicklinski G, De Berardinis V, Zaparucha A, Nonglaton G and Anxionnaz-Minvielle Z
Biotechnology Journal 16 (10), e2100010, 2021 - Microbial Diversity and Activity During the Biodegradation in Seawater of Various Substitutes to Conventional Plastic Cotton Swab Sticks
Jacquin J, Callac N, Cheng JG, Giraud C, Gorand Y, Denoual C, Pujo-Pay M, Conan P, Meistertzheim AL, Barbe V, Bruzaud S and Ghiglione JF
Frontiers in Microbiology 12, e604395, 2021 - Purification and Characterization of Nit, a Robust Thermostable Nitrilase From Parabukholderia phymatum
Bessonnet T, Mariage A, Petit JL, Pellouin V, Debard A, Zaparucha A, Vergne-Vaxelaire C and de Berardinis V
Frontiers in Bioengineering and Biotechnology 9, e686362, 2021